Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 10 of 10
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File Organism Size Type Description
Anopheles-epiroticus-Epiroticus2_CONTIGS_AepiE1.fa.gz Anopheles epiroticus 61.73 MB Contigs Epiroticus2 strain genomic contig sequences, AepiE1 assembly.
Anopheles-epiroticus-Epiroticus2_SCAFFOLDS_AepiE1.fa.gz Anopheles epiroticus 62.03 MB Scaffolds Epiroticus2 strain genomic scaffold sequences, AepiE1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Anopheles-epiroticus-Epiroticus2_PEPTIDES_AepiE1.7.fa.gz Anopheles epiroticus 4.25 MB Peptides Epiroticus2 strain peptide sequences, AepiE1.7 geneset.
Anopheles-epiroticus-Epiroticus2_TRANSCRIPTS_AepiE1.7.fa.gz Anopheles epiroticus 6.54 MB Transcripts Epiroticus2 strain transcript sequences, AepiE1.7 geneset.
Anopheles-epiroticus-Epiroticus2_BASEFEATURES_AepiE1.7.gff3.gz Anopheles epiroticus 1.7 MB Basefeatures Epiroticus2 strain AepiE1.7 geneset in GFF3 format.
Anopheles-epiroticus-Epiroticus2_BASEFEATURES_AepiE1.7.gtf.gz Anopheles epiroticus 1.39 MB Basefeatures Epiroticus2 strain AepiE1.7 geneset in GTF (v2.2) format.
Anopheles-epiroticus-Epiroticus2_CONTIG2SCAFFOLD_AepiE1.agp.gz Anopheles epiroticus 171.85 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Anopheles epiroticus, AepiE1 assembly.
Anopheles-epiroticus-Epiroticus2_MAPPINGS_AepiE1.3-AepiE1.4.txt Anopheles epiroticus 11.92 KB ID Mapping Stable ID mapping between genesets AepiE1.3 and AepiE1.4 (RNA gene update)
Anopheles-epiroticus-Epiroticus2_REPEATS.lib Anopheles epiroticus 231.83 KB RepeatMasker library RepeatMasker library file of repeats for Anopheles epiroticus, Epiroticus2 strain.
Anopheles-epiroticus-Epiroticus2_REPEATFEATURES_AepiE1.gff3.gz Anopheles epiroticus 3.37 MB Repeat features Epiroticus2 strain AepiE1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.