Data files

VectorBase is committed to a new release every two months. A list of changes and the latest data (e.g., current gene sets) relative to a specific release can be found in our release notes. Current and archived data are available for download below (an FAQ provides a summary of the file types).

Displaying 1 - 9 of 9
Double-click species to show assemblies
File Organism Size Type Description
Leptotrombidium-deliense-UoL-UT_CONTIGS_LdelU1.fa.gz Leptotrombidium deliense 36.45 MB Contigs UoL-UT strain genomic contigs sequences, LdelU1 assembly.
Leptotrombidium-deliense-UoL-UT_SCAFFOLDS_LdelU1.fa.gz Leptotrombidium deliense 36.44 MB Scaffolds UoL-UT strain genomic scaffolds sequences, LdelU1 assembly, softmasked using RepeatMasker, Dust, and TRF.
Leptotrombidium-deliense-UoL-UT_PEPTIDES_LdelU1.1.fa.gz Leptotrombidium deliense 3.42 MB Peptides UoL-UT strain peptide sequences, LdelU1.1 geneset.
Leptotrombidium-deliense-UoL-UT_TRANSCRIPTS_LdelU1.1.fa.gz Leptotrombidium deliense 5.07 MB Transcripts UoL-UT strain transcript sequences, LdelU1.1 geneset.
Leptotrombidium-deliense-UoL-UT_BASEFEATURES_LdelU1.1.gff3.gz Leptotrombidium deliense 2.68 MB Basefeatures UoL-UT strain LdelU1.1 geneset in GFF3 format.
Leptotrombidium-deliense-UoL-UT_BASEFEATURES_LdelU1.1.gtf.gz Leptotrombidium deliense 1.27 MB Basefeatures UoL-UT strain LdelU1.1 geneset in GTF (v2.2) format.
Leptotrombidium-deliense-UoL-UT_CONTIG2SCAFFOLD_LdelU1.agp.gz Leptotrombidium deliense 375.2 KB Contig to Scaffold mapping AGP (v2.0) file relating contigs to scaffolds for the Leptotrombidium deliense UoL-UT strain, LdelU1 assembly.
Leptotrombidium-deliense-UoL-UT_REPEATS.lib.gz Leptotrombidium deliense 380.46 KB RepeatMasker library RepeatMasker library file of repeats for Leptotrombidium deliense.
Leptotrombidium-deliense-UoL-UT_REPEATFEATURES_LdelU1.gff3.gz Leptotrombidium deliense 3.44 MB Repeat features UoL-UT strain LdelU1 repeat features (RepeatMasker, Dust, TRF) in GFF3 format.